 Fungal 
  ecology
Fungal 
  ecology
Wood rotting fungi
 There 
  are many fungi, both saprotrophic and parasitic, that decay wood and youll 
  find a great deal of information in the reference given in the button.
There 
  are many fungi, both saprotrophic and parasitic, that decay wood and youll 
  find a great deal of information in the reference given in the button.
Examples of saprotrophs found on dead wood lying on the ground are Chlorociboria 
  aeruginascens  (which often stains the wood the same colour, as shown here
 
  (which often stains the wood the same colour, as shown here  ), Plectania campylospora
 
  ), Plectania campylospora  , 
  Polyporus arcularius
, 
  Polyporus arcularius  and Stereum ostrea
 
  and Stereum ostrea  . 
  The densely clustered caps of Coprinus disseminatus
. 
  The densely clustered caps of Coprinus disseminatus  are often found around the bases of old stumps that have been colonised by the 
  mycelium of this species.
 
  are often found around the bases of old stumps that have been colonised by the 
  mycelium of this species. 
When you look at a majestic forest eucalypt remember that the bulk of the tree 
  is the dead heartwood. The living parts are the roots, leaves and relatively 
  thin layer under the bark. Thus, live trees also provide scope for many saprotrophs 
  and Laetiporus portentosus  is an example of a saprotrophic fungus, feeding on the dead heartwood in living 
  trees.
 
  is an example of a saprotrophic fungus, feeding on the dead heartwood in living 
  trees. 
On the other hand, Armillaria luteobubalina  is an aggressive parasite, capable of attacking and killing many plant species 
  after which it feeds on the dead wood. It often produces dense clusters of mushrooms 
  on dead wood or at the bases of live trees of various species. The fungus is 
  an endemic Australian species and is widespread through south-eastern Australia. 
  Armillaria is a problem in the Australian National Botanic Gardens in 
  Canberra,
 
  is an aggressive parasite, capable of attacking and killing many plant species 
  after which it feeds on the dead wood. It often produces dense clusters of mushrooms 
  on dead wood or at the bases of live trees of various species. The fungus is 
  an endemic Australian species and is widespread through south-eastern Australia. 
  Armillaria is a problem in the Australian National Botanic Gardens in 
  Canberra,  where it has killed mature trees in several garden beds
 
  where it has killed mature trees in several garden beds  . 
  In the botanic gardens it spreads mostly by root-to-root contact and one way 
  of controlling its spread is to put a physical barrier between the roots of 
  infected and healthy trees. This photo
. 
  In the botanic gardens it spreads mostly by root-to-root contact and one way 
  of controlling its spread is to put a physical barrier between the roots of 
  infected and healthy trees. This photo  shows a bitumen road between the Gardens' Rainforest Gully (out of the picture, 
  to the left) and (on the right) a garden bed with an Armillaria infestation. 
  In order to keep Armillaria out of the Rainforest Gully, a trench was 
  dug along the edge of the road, a physical barrier put in and the trench then 
  re-filled and re-bitumened.
 
  shows a bitumen road between the Gardens' Rainforest Gully (out of the picture, 
  to the left) and (on the right) a garden bed with an Armillaria infestation. 
  In order to keep Armillaria out of the Rainforest Gully, a trench was 
  dug along the edge of the road, a physical barrier put in and the trench then 
  re-filled and re-bitumened.  You 
  can see the later strip of bitumen on the right hand side of the road (just 
  to the left of the white, concrete gutter).
You 
  can see the later strip of bitumen on the right hand side of the road (just 
  to the left of the white, concrete gutter).
However, mushrooms growing from tree bases dont always mean trouble. 
  Gymnopilus pampeanus  also often produces dense clusters of mushrooms on dead wood or at the bases 
  of various live trees. Some people mistakenly believe they have an Armillaria 
  problem when they see Gymnopilus, for the two have similar growth habits. 
  However, the Gymnopilus mycelium feeds largely on dead wood and is, at 
  most, a mild parasite that may inflict damage to a tree that is already otherwise 
  stressed.
 
  also often produces dense clusters of mushrooms on dead wood or at the bases 
  of various live trees. Some people mistakenly believe they have an Armillaria 
  problem when they see Gymnopilus, for the two have similar growth habits. 
  However, the Gymnopilus mycelium feeds largely on dead wood and is, at 
  most, a mild parasite that may inflict damage to a tree that is already otherwise 
  stressed. 
White rot and brown rot
The major constituents of wood are the polymers cellulose, hemicellulose and lignin. A polymer is a bit like a long chain. While a chain can be quite long and heavy, it's just a series of simple links joined together. In a similar way, each of the above polymers is built up by joining together a string of much simpler chemical compounds. In the case of cellulose and hemicellulose the basic building blocks are various simple sugars. For example, the basic building block in cellulose is glucose - a simple sugar that turns up in many foods, as you can see from the ingredients labels on various jars, cans or packets that you buy during your grocery shopping. The building blocks of lignin are more complex and lignin helps protect cellulose against microbial attack.
There are two broad classes of wood-rotting macrofungi. Fungi which decompose 
  cellulose, hemicellulose and lignin leave the wood very pale in colour and often 
  with a fibrous to stringy consistency. These are called white rot fungi 
  and this photo  shows an example of wood with white rot. Fungi which can decompose only cellulose 
  and hemicellulose leave the wood coloured brown and, rather than fibrous, cracked 
  into cubical fragments,
 
  shows an example of wood with white rot. Fungi which can decompose only cellulose 
  and hemicellulose leave the wood coloured brown and, rather than fibrous, cracked 
  into cubical fragments,  which break off readily. These are the brown rot fungi. The next photo
 
  which break off readily. These are the brown rot fungi. The next photo 
   shows what you get when you crumble, or rub, white and brown rot woods in your 
  hands. There are several types of white rot and you can find out more here: 
  [http://www.forestpathology.org/decay.html]
 
  shows what you get when you crumble, or rub, white and brown rot woods in your 
  hands. There are several types of white rot and you can find out more here: 
  [http://www.forestpathology.org/decay.html]
Examples of white-rot fungi are Armillaria luteobubalina  , 
  Schizophyllum commune
, 
  Schizophyllum commune  and Daldinia concentrica
 
  and Daldinia concentrica  .
.
Examples of fungi causing brown rots are Fomitopsis lilacino-gilva  Laetiporus portentosus
 
  Laetiporus portentosus  and Serpula lacrymans
 
  and Serpula lacrymans  .
. 
There are more species of white rot fungi than there are of brown rot fungi. In the northern hemisphere many of the brown rot fungi are found on conifers in the boreal areas but in Australia there has been no systematic study into the geographic or host preferences of brown rot species. However, there is some evidence of a preference for cool-temperate areas.
Fairly often, when you cut open a piece of dead wood that's still fairly firm, 
  you'll see black lines marking out zones of varying size. These black zone lines 
  mark out the extremities of the separate mycelia. Such wood, called spalted 
  wood, is often sought after by craftspeople working with wood, for the irregular 
  lines add to the attractiveness of the finished item. The following photos show, 
  first, numerous fruiting bodies of the polypore Trametes versicolor growing 
  out of a tree-stump and, second, the wood inside the stump.  
 
   
 
|  Ornament using spalted wood. | 
You can see various zone lines formed by the mycelia in the wood. The next 
  photo  is a close-up view of the black zone lines in another piece of wood. Here are 
  an items made from spalted wood.
 
  is a close-up view of the black zone lines in another piece of wood. Here are 
  an items made from spalted wood.
Some white rot fungi, such as Trametes versicolor, decay lignin and 
  cellulose simultaneously whereas others decay lignin first, leaving a residue 
  of cellulose and hemicellulose for later decay. In Chile, Nothofagus 
  wood that has been selectively de-lignified by Ganoderma australe  is fed to cattle, for the lignin-free residue is easily digested with the help 
  of the micro-organisms found in cattle guts. Such wood is called palo podrido 
  and you can find out a bit more about it here. [http://www.forestpathology.org/decay.html] 
  There is also evidence of moose in Alaska feeding on logs decayed by Ganoderma 
  tsugae.
 
  is fed to cattle, for the lignin-free residue is easily digested with the help 
  of the micro-organisms found in cattle guts. Such wood is called palo podrido 
  and you can find out a bit more about it here. [http://www.forestpathology.org/decay.html] 
  There is also evidence of moose in Alaska feeding on logs decayed by Ganoderma 
  tsugae. 
Wood rotting fungi, nematodes and bacteria
Nitrogen is an essential element for all living organisms, but wood has a low nitrogen content. Many wood-rotting fungi can grow at very low nitrogen levels and are very efficient at both scavenging and re-cycling nitrogen, but some have additional strategies. The mycelia of some wood-rotting fungi also trap and feed on nematodes that can often be found in decaying wood. By trapping nematodes (using hyphae with sticky knobs, for example), these fungi supplement their nitrogen intake. Species in the genus Hohenbuehelia and Pleurotus trap nematodes. These fungi produce stemless-mushrooms as fruiting bodies, the caps being attached directly to the wood  either at the top or side of the cap.
|  Pleurotus ostreatus on a toilet roll. | 
Bacteria are also common in rotting wood and laboratory experiments with the 
  mycelium of Pleurotus ostreatus have shown that this fungus will destroy 
  and feed on bacterial colonies. Pleurotus ostreatus is widely cultivated 
  (in many colour variations) and sold in supermarkets as the Oyster Mushroom. 
   This 
  fungus can grow on a variety of cellulose-containing materials - even toilet 
  rolls, as shown at the right.
This 
  fungus can grow on a variety of cellulose-containing materials - even toilet 
  rolls, as shown at the right.
An excellent source of authoritative information about all types of predatory, wood-rotting fungi is in this site, written by George Barron, who has spent many years studying these fungi [http://www.uoguelph.ca/~gbarron/MISC2003/feb03.htm].
Forest litter and woodchips
Many fungi exploit the leaf and twig litter that can be found on forest floors, 
  with the mycelia confined just to the litter layer  extending neither 
  to the soil below nor to the larger pieces of fallen wood. This is especially 
  the case in the tropics, but also in sheltered temperate areas (where the litter 
  layer is protected against the drying effects of sun and wind). Many of the 
  fungi that exploit the litter layers produce tiny fruiting bodies, but at times 
  in great abundance. For example, you may find hundreds of Marasmius haematocephalus 
   mushrooms popping up from the forest litter. The individual caps are under a 
  centimetre in diameter and there are many litter decomposers that produce mushrooms 
  with caps only a couple of millimetres in diameter. You can also find various 
  polypores, ascomycetes and corticioid fungi on leaf and twig litter. Here is 
  a close-up view of the toothed fruiting body of a species of the corticioid 
  genus Sistotrema
 
  mushrooms popping up from the forest litter. The individual caps are under a 
  centimetre in diameter and there are many litter decomposers that produce mushrooms 
  with caps only a couple of millimetres in diameter. You can also find various 
  polypores, ascomycetes and corticioid fungi on leaf and twig litter. Here is 
  a close-up view of the toothed fruiting body of a species of the corticioid 
  genus Sistotrema  that was growing on some long-dead, eucalypt leaves lying on the ground. The 
  spines are one to two millimetres long. The fruiting body grew on the underside 
  of the leaf, so the spines were pointing down.
 
  that was growing on some long-dead, eucalypt leaves lying on the ground. The 
  spines are one to two millimetres long. The fruiting body grew on the underside 
  of the leaf, so the spines were pointing down. 
Turning now to a suburban setting, think of all the wood that is spread around 
  parks and home gardens in the form of woodchip mulch. Hypholoma aurantiaca 
   is a common mushroom in woodchip-mulched gardens in Canberra. The species is 
  well-known in Europe and may have been introduced to Australia. Some may think 
  nothing much of the fungi on woodchip mulch but Peter Shaw, of the University 
  of Surrey in England, writes: "It seems that the combination of deep woody 
  litter and regular disturbance provides a habitat with no natural equivalent, 
  so that the fungal community which appears is unusual." You can find more 
  about his investigations in this link. [http://www.chezshaw.demon.co.uk/work/research/woodchips/woodchips.html]
 
  is a common mushroom in woodchip-mulched gardens in Canberra. The species is 
  well-known in Europe and may have been introduced to Australia. Some may think 
  nothing much of the fungi on woodchip mulch but Peter Shaw, of the University 
  of Surrey in England, writes: "It seems that the combination of deep woody 
  litter and regular disturbance provides a habitat with no natural equivalent, 
  so that the fungal community which appears is unusual." You can find more 
  about his investigations in this link. [http://www.chezshaw.demon.co.uk/work/research/woodchips/woodchips.html] 
LINKS TO OTHER SECTIONS
- Wood rotting fungi
- Dung fungi
- Fungi and invertebrates
- Fungi and vertibrates
- Fungi and fire
- Fungi versus fungi
- Mycorrhizas
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